Difference between revisions of "File List"

From SICDB Doc
Jump to navigation Jump to search
Line 26: Line 26:
| unitlog.csv.gz || Information about the patient's stay  ||  See [[Unitlog]] for further information.
| unitlog.csv.gz || Information about the patient's stay  ||  See [[Unitlog]] for further information.
|}
|}
=== cases.csv.gz ===
Contains basic data about admissions to icu. See [[Case Data]] for table details and [[Case Description]].
=== d_references.csv.gz ===
Contains the dictionary for all encoded fields in the SICdb dataset. See [[d_references]] for further information.
=== data_float_h.csv.gz ===
Contains hourly aggregated float data like monitor [[Signal Data|signals]] or respirator settings. Additionally raw minute data is included.See [[data_float_h]] and [[Signal Data]] for further information.
=== data_ref.csv.gz ===
Contains encoded (nominal) data related to a case.See [[data_ref]] for further information.
=== laboratory.csv.gz ===
Contains laboratory results. See [[Laboratory Data]] for further information.
=== medication.csv.gz ===
Contains data about medication given during ICU stay. See [[Medication Data]] for further information.
=== treatment.csv.gz ===
Contains data about treatment. See [[Treatment Data]] for further information.
=== unitlog.csv.gz ===
See [[Unitlog]] for further information.


== Configuration Files ==
== Configuration Files ==

Revision as of 15:28, 28 October 2022

The SICdb dataset consists from data files, a reference file

Data Files

All data files are gzip compressed RFC4180 comma seperated files.

Files
Name Short description Documentation
cases.csv.gz Contains basic data about admissions to icu. See Case Data for table details and Case Description. Documentation
d_references.csv.gz Contains the dictionary for all encoded fields in the SICdb dataset. d_references
data_float_h.csv.gz Contains hourly aggregated float data like monitor signals or respirator settings. Additionally raw minute data is included.See data_float_h and Signal Data for further information. data_float_h
data_ref.csv.gz Contains encoded (nominal) data related to an admission. data_ref
laboratory.csv.gz Contains laboratory results. Laboratory Data
medication.csv.gz Contains data about medication given during ICU stay. Medication Data
treatment.csv.gz Contains data about medication given during ICU stay. Medication Data
unitlog.csv.gz Information about the patient's stay See Unitlog for further information.

Configuration Files

docker-compose.yml

This file is needed to install our database software. See Software Description for further information, and Get Started for installation instructions.

DatasetConfiguration.conf

Our database software needs this metadata for building up the database. It contains field data types and SQL table structure, that cannot be saved in .csv files.

RooData Folder and contents

This data is used by our software and contains field and table configurations.